Aug 17, 2018 4:32 PM
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Database Query
SeedGenes Profile: AtCAF 2
Gene Information
Gene Symbol
AtCAF 2
Chromosome Locus
At1g23400
Alleles in Database
2
See List
OR
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Identity Confidence
Confirmed
Alias Symbol
Gene Class
Embryo Defective
Predicted Function
Chloroplast Intron Splicing Factor
Function Details
Splicing of plastid group II introns
Gene Evidence
Border Recovery
Barkan / Salk (2 alleles)
Database Release
October, 2007
Predicted Sequences
Gene:
2669 nucleotides
mRNA:
1822 nucleotides
Protein:
564 amino acids
cDNA Status
FLcDNA Available:
AY062732
Top BLAST Hits
Arabidopsis
:
AT2G20020.1 (55%)
Plant ESTs:
Maize (Zea mays) (46%)
Model Genomes:
None
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
263014_at
Mutant Information
Allele Symbol
atcaf 2-1
Mutant Class
Embryo Defective
Source of Mutant
Barkan / Salk
Mutant Line Number
SALK_049304
Ecotype
Columbia
Genetic Background
ABRC Stock
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Exon 2
Terminal Phenotype
Transition
Nomarski Phenotype
Allelism Evidence
Reference Allele
Database Release
October, 2007
Seed Color
Embryo Color
Percent Mutant Seeds
Chi - Square
Seeds Counted
Percent Top Half
Chi - Square
Average Seed Length
Average Embryo Length