SeedGenes Profile: AtCAF 2

Gene Information Gene Symbol AtCAF 2 Chromosome Locus At1g23400   Alleles in Database 2   See List OR Show All Identity Confidence Confirmed Alias Symbol   Gene Class Embryo Defective Predicted Function Chloroplast Intron Splicing Factor Function Details Splicing of plastid group II introns Gene Evidence Border Recovery Barkan / Salk (2 alleles) Database Release October, 2007 Predicted Sequences Gene: 2669 nucleotides mRNA: 1822 nucleotides Protein:   564 amino acids cDNA Status FLcDNA Available: AY062732 Top BLAST Hits Arabidopsis: AT2G20020.1 (55%) Plant ESTs: Maize (Zea mays) (46%) Model Genomes:   None Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 263014_at

Mutant Information Allele Symbol atcaf 2-1 atcaf 2-2 Mutant Class Embryo Defective Seed Pigment Source of Mutant Barkan / Salk Barkan / Salk Mutant Line Number SALK_049304 SALK_008478 Ecotype Columbia Columbia Genetic Background     ABRC Stock     Mutagen Treatment T-DNA T-DNA Insertion Mutant Yes   Details Yes   Details Flanking Sequence     Location of Mutation Exon 2 Intron 5 Terminal Phenotype Transition Pigment Defective Nomarski Phenotype Allelism Evidence Reference Allele Sequence Identity Database Release October, 2007 October, 2007 Seed Color     Embryo Color     Percent Mutant Seeds     Chi - Square     Seeds Counted     Percent Top Half     Chi - Square     Average Seed Length     Average Embryo Length