SeedGenes Profile: AtCAF 2

Gene Information Gene Symbol AtCAF 2 Chromosome Locus At1g23400   Alleles in Database 2   See List OR Show All Identity Confidence Confirmed Alias Symbol   Gene Class Embryo Defective Predicted Function Chloroplast Intron Splicing Factor Function Details Splicing of plastid group II introns Gene Evidence Border Recovery Barkan / Salk (2 alleles) Database Release October, 2007 Predicted Sequences Gene: 2669 nucleotides mRNA: 1822 nucleotides Protein:   564 amino acids cDNA Status FLcDNA Available: AY062732 Top BLAST Hits Arabidopsis: AT2G20020.1 (55%) Plant ESTs: Maize (Zea mays) (46%) Model Genomes:   None Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 263014_at

Mutant Information Allele Symbol atcaf 2-2 Mutant Class Seed Pigment Source of Mutant Barkan / Salk Mutant Line Number SALK_008478 Ecotype Columbia Genetic Background   ABRC Stock   Mutagen Treatment T-DNA Insertion Mutant Yes   Details Flanking Sequence   Location of Mutation Intron 5 Terminal Phenotype Pigment Defective Nomarski Phenotype   Allelism Evidence Sequence Identity Database Release October, 2007 Seed Color   Embryo Color   Percent Mutant Seeds   Chi - Square   Seeds Counted   Percent Top Half   Chi - Square   Average Seed Length   Average Embryo Length