OSU Syngenta vbi

SeedGenes Profile: AtCFM 2

Gene Information
Gene Symbol AtCFM 2
Chromosome Locus At3g01370   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function Chloroplast Intron Splicing Factor
Function Details Splicing of plastid group II introns
Gene Evidence
Border Recovery
Barkan / Salk (1 allele)
Border Recovery
Barkan / (1 allele)
Database Release October, 2007
Predicted Sequences
Gene:4696 nucleotides
mRNA: 3287 nucleotides
Protein:  1011 amino acids
cDNA Status FLcDNA Available: AY136347
Top BLAST Hits
Arabidopsis: AT3G23070.1 (41%)
Plant ESTs: Brassica napus (82%)
Model Genomes:   None
Subcellular Localization TargetP Targeted to Chloroplasts
SUBA
mRNA Expression Data NASCArray Spot History for 258949_at
    
Mutant Information
Allele Symbol atcfm 2-1atcfm 2-2
Mutant Class Embryo DefectiveSeed Pigment
Source of Mutant Barkan / SalkBarkan /
Mutant Line Number SALK_000703 
Ecotype Columbia 
Genetic Background   
ABRC Stock   
Mutagen Treatment T-DNAnull
Insertion Mutant Yes   DetailsYes   Details
Flanking Sequence   
Location of Mutation Exon 5 
Terminal Phenotype Not AvailablePigment Defective
Nomarski Phenotype
Allelism Evidence Reference AlleleSequence Identity
Database Release October, 2007October, 2007
Seed Color   
Embryo Color   
Percent Mutant Seeds   
Chi - Square   
Seeds Counted   
Percent Top Half   
Chi - Square   
Average Seed Length   
Average Embryo Length