SeedGenes Profile: CLA

Gene Information Gene Symbol CLA Chromosome Locus At4g15560   Alleles in Database 2   See List OR Show All Identity Confidence Confirmed Alias Symbol   Gene Class Seed Pigment Predicted Function 1-Deoxyxylulose 5-Phosphate Synthase Function Details Biosynthesis of isoprenoids required for normal chloroplast development Gene Evidence Molecular Complementation P. Mandel (1 allele) Border Recovery P. Mandel (1 allele) Double Border Recovery Meinke / Syngenta (1 allele) Database Release March, 2002 Predicted Sequences Gene: 3659 nucleotides mRNA: 2776 nucleotides Protein:   717 amino acids cDNA Status FLcDNA Available: Y14333 Top BLAST Hits Arabidopsis: AT3G21500.1 (77%) Plant ESTs: Brassica napus (95%) Model Genomes:   Escherichia coli (47%) Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 245281_at

Mutant Information Allele Symbol cla-1 Mutant Class Seed Pigment Source of Mutant Mandel / Feldmann Mutant Line Number   Ecotype Wassilewskija Genetic Background   ABRC Stock   Mutagen Treatment T-DNA Insertion Mutant Yes   Details Flanking Sequence   Location of Mutation Exon 3 Terminal Phenotype Pigment Defective Nomarski Phenotype   Allelism Evidence Sequence Identity Database Release March, 2002 Seed Color White Embryo Color White Percent Mutant Seeds 25.6 % Chi - Square 0.2 Seeds Counted 1143 Percent Top Half 57.7 % Chi - Square 6.9 Average Seed Length   Average Embryo Length