Aug 17, 2018 4:32 PM
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Database Query
SeedGenes Profile: DME
Gene Information
Gene Symbol
DME
Chromosome Locus
At5g04560
Alleles in Database
1
Identity Confidence
Confirmed
Alias Symbol
EMB 1649
(D. Meinke) Sequence Identity
Gene Class
50% Defective Seeds
Predicted Function
DNA Glycosylase
Function Details
Role in gene imprinting in developing seed
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Database Release
September, 2002
Predicted Sequences
Gene:
9200 nucleotides
mRNA:
6475 nucleotides
Protein:
1987 amino acids
cDNA Status
FLcDNA Available:
AF521596
Top BLAST Hits
Arabidopsis
:
AT2G36490.1 (65%)
Plant ESTs:
Brassica napus (84%)
Model Genomes:
None
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
250834_at
Mutant Information
Allele Symbol
dme-1S
Mutant Class
50% Defective Seeds
Source of Mutant
Meinke / Syngenta
Mutant Line Number
32448
Ecotype
Columbia
Genetic Background
ABRC Stock
CS16127
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Details
(Help)
Location of Mutation
Exon 1
Terminal Phenotype
Preglobular
Details
Nomarski Phenotype
Images
Allelism Evidence
Reference Allele
Database Release
September, 2002
Seed Color
White
Embryo Color
White
Percent Mutant Seeds
37.3 %
Chi - Square
35.8
Seeds Counted
555
Percent Top Half
56.0 %
Chi - Square
3.0
Average Seed Length
520 ± 60 µm
Average Embryo Length
20 ± 10 µm