Aug 17, 2018 4:32 PM
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Database Query
SeedGenes Profile: EMB 1006
Gene Information
Gene Symbol
EMB 1006
Chromosome Locus
At5g50280
Alleles in Database
1
Identity Confidence
Not Confirmed
Alias Symbol
Gene Class
Embryo Defective
Predicted Function
PPR Protein
Function Details
Processing of organellar mRNAs
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Database Release
March, 2002
Predicted Sequences
Gene:
2267 nucleotides
mRNA:
2172 nucleotides
Protein:
723 amino acids
cDNA Status
EST Identified
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Vitis vinifera (68%)
Model Genomes:
None
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
248547_at
Mutant Information
Allele Symbol
emb 1006
Mutant Class
Embryo Defective
Source of Mutant
Meinke / Syngenta
Mutant Line Number
648
Ecotype
Columbia
Genetic Background
ABRC Stock
CS16006
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Details
(Help)
Location of Mutation
Exon 1
Terminal Phenotype
Globular
Details
Nomarski Phenotype
Images
Allelism Evidence
Reference Allele
Database Release
March, 2002
Seed Color
White
Embryo Color
White
Percent Mutant Seeds
24.9 %
Chi - Square
<0.1
Seeds Counted
1063
Percent Top Half
45.3 %
Chi - Square
2.4
Average Seed Length
480 ± 30 µm
Average Embryo Length
50 ± 20 µm