OSU Syngenta vbi

SeedGenes Profile: EMB 1080

Gene Information
Gene Symbol EMB 1080
Chromosome Locus At3g48930   tair
Alleles in Database 1
Identity Confidence Not Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function Ribosomal Protein S11
Function Details Translation in cytoplasm
Gene Evidence
Single Border Recovery
Meinke / Syngenta (1 allele)
Database Release September, 2002
Predicted Sequences
Gene:1511 nucleotides
mRNA: 821 nucleotides
Protein:  160 amino acids
cDNA Status FLcDNA Available: AY059947
Top BLAST Hits
Arabidopsis: AT5G23740.1 (94%)
Plant ESTs: Brassica napus (93%)
Model Genomes:  Neurospora crassa (66%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
mRNA Expression Data NASCArray Spot History for 252297_at
Mutant Information
Allele Symbol emb 1080
Mutant Class Embryo Defective
Source of Mutant Meinke / Syngenta
Mutant Line Number 9106
Ecotype Columbia
Genetic Background  
ABRC Stock CS16116
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence Details  (Help)
Location of Mutation Exon 4
Terminal Phenotype Globular  Details
Nomarski Phenotype   Images
Allelism Evidence Reference Allele
Database Release September, 2002
Seed Color White to Pale Yellow
Embryo Color White to Pale Yellow
Percent Mutant Seeds 22.2 %
Chi - Square 3.6
Seeds Counted 830
Percent Top Half 63.0 %
Chi - Square 12.5
Average Seed Length 470 ± 50 µm
Average Embryo Length 90 ± 40 µm