SeedGenes Profile: EMB 1275

Gene Information Gene Symbol EMB 1275 Chromosome Locus At1g55350   Alleles in Database 6   See List OR Show All Identity Confidence Confirmed Alias Symbol AtDEK 1 (Olsen; Ingram) Sequence Identity EMB 80 (D. Meinke) Complemetation Test Gene Class Embryo Defective Predicted Function Calpain-Type Cysteine Protease Function Details Similar to maize DEK1 Gene Evidence Border Recovery Olsen / Dellaporta (1 allele) Border Recovery Olsen / GABI (1 allele) Border Recovery Ingram / Salk (1 allele) Double Border Recovery Meinke / Syngenta (1 allele) Single Border Recovery Meinke / Syngenta (1 allele) Database Release September, 2004 Predicted Sequences Gene: 10803 nucleotides mRNA: 7220 nucleotides Protein:   2151 amino acids cDNA Status FLcDNA Available: AY061803 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Rice (Oryza sativa) (70%) Model Genomes:   Danio rerio (34%) Subcellular Localization TargetP Not Targeted to Cell Compartment SUBA mRNA Expression Data NASCArray Spot History for 259646_at

Mutant Information Allele Symbol dek 1-1 Mutant Class Embryo Defective Source of Mutant Olsen / Dellaporta Mutant Line Number   Ecotype Columbia Genetic Background   ABRC Stock   Mutagen Treatment T-DNA Insertion Mutant Yes   Details Flanking Sequence   Location of Mutation Intron 11 Terminal Phenotype Globular Nomarski Phenotype   Allelism Evidence Sequence Identity Database Release October, 2007 Seed Color   Embryo Color   Percent Mutant Seeds   Chi - Square   Seeds Counted   Percent Top Half   Chi - Square   Average Seed Length   Average Embryo Length