Aug 17, 2018 4:32 PM
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Database Query
SeedGenes Profile: EMB 1275
Gene Information
Gene Symbol
EMB 1275
Chromosome Locus
At1g55350
Alleles in Database
6
See List
OR
Show All
Identity Confidence
Confirmed
Alias Symbol
AtDEK 1
(Olsen; Ingram) Sequence Identity
EMB 80
(D. Meinke) Complemetation Test
Gene Class
Embryo Defective
Predicted Function
Calpain-Type Cysteine Protease
Function Details
Similar to maize DEK1
Gene Evidence
Border Recovery
Olsen / Dellaporta (1 allele)
Border Recovery
Olsen / GABI (1 allele)
Border Recovery
Ingram / Salk (1 allele)
Double Border Recovery
Meinke / Syngenta (1 allele)
Single Border Recovery
Meinke / Syngenta (1 allele)
Database Release
September, 2004
Predicted Sequences
Gene:
10803 nucleotides
mRNA:
7220 nucleotides
Protein:
2151 amino acids
cDNA Status
FLcDNA Available:
AY061803
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Rice (Oryza sativa) (70%)
Model Genomes:
Danio rerio (34%)
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
259646_at
Mutant Information
Allele Symbol
emb 80
Mutant Class
Embryo Defective
Source of Mutant
Meinke / DuPont
Mutant Line Number
98
Ecotype
Wassilewskija
Genetic Background
ABRC Stock
Mutagen Treatment
T-DNA
Insertion Mutant
No
Flanking Sequence
Location of Mutation
Terminal Phenotype
Preglobular
Nomarski Phenotype
Globular
Allelism Evidence
Complementation Test
Database Release
December, 2010
Seed Color
Embryo Color
Percent Mutant Seeds
23.4 %
Chi - Square
Seeds Counted
Percent Top Half
50.4 %
Chi - Square
Average Seed Length
Average Embryo Length