OSU Syngenta vbi

SeedGenes Profile: EMB 1379

Gene Information
Gene Symbol EMB 1379
Chromosome Locus At5g21140   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function Uncertain
Function Details Weak similarity to DNA repair protein (Nse1)
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Single Border Recovery
Meinke / Salk (1 allele)
Database Release March, 2003
Predicted Sequences
Gene:2524 nucleotides
mRNA: 1357 nucleotides
Protein:  312 amino acids
cDNA Status FLcDNA Available: BX831078
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Brassica napus (82%)
Model Genomes:   None
Subcellular Localization TargetP Not Targeted to Cell Compartment
SUBA
    
Mutant Information
Allele Symbol emb 1379-2
Mutant Class Embryo Defective
Source of Mutant Meinke / Salk
Mutant Line Number SALK_136483
Ecotype Columbia
Genetic Background  
ABRC Stock CS24066
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence  
Location of Mutation Intron 3
Terminal Phenotype Globular  Details
Nomarski Phenotype   Images
Allelism Evidence Complementation Test; Sequence Identity
Database Release March, 2004
Seed Color White
Embryo Color White
Percent Mutant Seeds 26.7 %
Chi - Square 1.3
Seeds Counted 846
Percent Top Half 56.2 %
Chi - Square 3.4
Average Seed Length 470 ± 60 µm
Average Embryo Length 20 ± 10 µm