SeedGenes Profile: EMB 1395

Gene Information Gene Symbol EMB 1395 Chromosome Locus At4g13940   Alleles in Database 3   See List OR Show All Identity Confidence Confirmed Alias Symbol HOG 1 (I. Furner) Sequence Identity MEE 58 (Sundaresan) Sequence Identity Gene Class Embryo Defective Predicted Function S-Adenosyl Homocysteine Hydrolase Function Details Amino acid and nucleotide metabolism; Indirect role in gene silencing Gene Evidence Double Border Recovery Meinke / Syngenta (1 allele) Border Recovery Furner / CSHL (1 allele) Border Recovery Furner / Salk (1 allele) Database Release September, 2003 Predicted Sequences Gene: 2278 nucleotides mRNA: 1990 nucleotides Protein:   485 amino acids cDNA Status FLcDNA Available: AF325037 Top BLAST Hits Arabidopsis: AT3G23810.1 (95%) Plant ESTs: Brassica napus (96%) Model Genomes:   Caenorhabditis elegans (58%) Subcellular Localization TargetP Not Targeted to Cell Compartment SUBA mRNA Expression Data NASCArray Spot History for 245356_at

Mutant Information Allele Symbol emb 1395 hog 1-4 Mutant Class Embryo Defective Embryo Defective Source of Mutant Meinke / Syngenta Furner / CSHL Mutant Line Number 18372 GT1724 Ecotype Wassilewskija   Genetic Background     ABRC Stock CS16194   Mutagen Treatment T-DNA Transposon Insertion Mutant Yes   Details Yes   Details Flanking Sequence Details  (Help)   Location of Mutation Intron 1 Exon 1 Terminal Phenotype Globular  Details Globular Nomarski Phenotype   Images Allelism Evidence Reference Allele Sequence Identity Database Release September, 2003 October, 2007 Seed Color White   Embryo Color White   Percent Mutant Seeds 23.8 %   Chi - Square 0.6   Seeds Counted 776   Percent Top Half 61.1 %   Chi - Square 9.1   Average Seed Length 330 ± 100 µm   Average Embryo Length 30 ± 30 µm