OSU Syngenta vbi

SeedGenes Profile: EMB 1401

Gene Information
Gene Symbol EMB 1401
Chromosome Locus At5g20920   tair
Alleles in Database 1
Identity Confidence Not Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function Translation Initiation Factor (EIF-2 Beta)
Function Details Attachment of ribosome small subunit in translation
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Database Release March, 2003
Predicted Sequences
Gene:2399 nucleotides
mRNA: 1196 nucleotides
Protein:  268 amino acids
cDNA Status FLcDNA Available: AF353095
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Brassica napus (85%)
Model Genomes:  Danio rerio (56%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
SUBA
mRNA Expression Data NASCArray Spot History for 246192_at
    
Mutant Information
Allele Symbol emb 1401
Mutant Class Embryo Defective
Source of Mutant Meinke / Syngenta
Mutant Line Number 19520
Ecotype Wassilewskija
Genetic Background  
ABRC Stock CS16153
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence Details  (Help)
Location of Mutation Upstream to Exon 1 in 5' UTR
Terminal Phenotype Cotyledon  Details
Nomarski Phenotype   Images
Allelism Evidence Reference Allele
Database Release March, 2003
Seed Color Pale Yellow
Embryo Color Pale Yellow
Percent Mutant Seeds 17.9 %
Chi - Square 18.8
Seeds Counted 708
Percent Top Half 59.1 %
Chi - Square 4.2
Average Seed Length 430 ± 40 µm
Average Embryo Length 160 ± 80 µm