OSU Syngenta vbi

SeedGenes Profile: EMB 1629

Gene Information
Gene Symbol EMB 1629
Chromosome Locus At5g57930   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol APO 2 (J. Meurer) Sequence Identity
Gene Class Embryo Defective
Predicted Function Accumulation of Iron-Sulfur Complexes in Chloroplasts
Function Details None
Gene Evidence
Molecular Complementation
D. Meinke (1 allele)
Double Border Recovery
Meinke / Syngenta (1 allele)
Single Border Recovery
Meinke / Salk (1 allele)
Database Release September, 2002
Predicted Sequences
Gene:1890 nucleotides
mRNA: 1557 nucleotides
Protein:  443 amino acids
cDNA Status FLcDNA Available: BX831804
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Populus (68%)
Model Genomes:   None
Subcellular Localization TargetP Targeted to Chloroplasts
SUBA
mRNA Expression Data NASCArray Spot History for 247889_at
    
Mutant Information
Allele Symbol emb 1629-2
Mutant Class Embryo Defective
Source of Mutant Meinke / Salk
Mutant Line Number SALK_101220
Ecotype Columbia
Genetic Background  
ABRC Stock CS24069
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence  
Location of Mutation Exon 3
Terminal Phenotype Globular  Details
Nomarski Phenotype   Images
Allelism Evidence Complementation Test; Sequence Identity
Database Release March, 2004
Seed Color White
Embryo Color White
Percent Mutant Seeds 25.7 %
Chi - Square 0.3
Seeds Counted 1070
Percent Top Half 49.1 %
Chi - Square 0.1
Average Seed Length 500 ± 60 µm
Average Embryo Length 90 ± 50 µm