OSU Syngenta vbi

SeedGenes Profile: EMB 1637

Gene Information
Gene Symbol EMB 1637
Chromosome Locus At3g57870   tair
Alleles in Database 3   See List OR Show All
Identity Confidence Confirmed
Alias Symbol SCE 1 (R. Vierstra) Sequence Identity
Gene Class Embryo Defective
Predicted Function SUMO Conjugating Enzyme (SCE1)
Function Details Protein modification; Putative role in stress response, cell cycle control
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Border Recovery
Vierstra / Salk (2 alleles)
Database Release March, 2003
Predicted Sequences
Gene:1705 nucleotides
mRNA: 908 nucleotides
Protein:  160 amino acids
cDNA Status FLcDNA Available: ATU44976
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Brassica napus (95%)
Model Genomes:  Homo sapiens (66%)
Subcellular Localization TargetP Targeted to Mitochondria
mRNA Expression Data NASCArray Spot History for 251561_at
Mutant Information
Allele Symbol emb 1637
Mutant Class Embryo Defective
Source of Mutant Meinke / Syngenta
Mutant Line Number 31703
Ecotype Columbia
Genetic Background  
ABRC Stock CS16155
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence Details  (Help)
Location of Mutation Intron 2 to Exon 4
Terminal Phenotype Cotyledon  Details
Nomarski Phenotype   Images
Allelism Evidence Reference Allele
Database Release March, 2003
Seed Color White to Pale Yellow
Embryo Color White to Pale Yellow
Percent Mutant Seeds 12.9 %
Chi - Square 55.9
Seeds Counted 714
Percent Top Half 55.4 %
Chi - Square 1.1
Average Seed Length 410 ± 60 µm
Average Embryo Length 130 ± 90 µm