OSU Syngenta vbi

SeedGenes Profile: EMB 1692

Gene Information
Gene Symbol EMB 1692
Chromosome Locus At5g62990   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function PORR Domain Protein
Function Details Probable role in organellar RNA splicing or metabolism
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Single Border Recovery
Meinke / Salk (1 allele)
Database Release March, 2002
Predicted Sequences
Gene:1485 nucleotides
mRNA: 1485 nucleotides
Protein:  494 amino acids
cDNA Status FLcDNA Available: DQ447107
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Tomato (Lycopersicon esculentum) (68%)
Model Genomes:   None
Subcellular Localization TargetP Targeted to Chloroplasts
mRNA Expression Data NASCArray Spot History for 247410_at
Mutant Information
Allele Symbol emb 1692-2
Mutant Class Embryo Defective
Source of Mutant Meinke / Salk
Mutant Line Number SALK_044699
Ecotype Columbia
Genetic Background  
ABRC Stock CS24071
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence  
Location of Mutation Upstream
Terminal Phenotype Transition  Details
Nomarski Phenotype   Images
Allelism Evidence Complementation Test; Sequence Identity
Database Release March, 2004
Seed Color White
Embryo Color White
Percent Mutant Seeds 25.3 %
Chi - Square 0.1
Seeds Counted 1235
Percent Top Half 53.0 %
Chi - Square 1.2
Average Seed Length 500 ± 60 µm
Average Embryo Length 130 ± 60 µm