SeedGenes Profile: EMB 1692

Gene Information Gene Symbol EMB 1692 Chromosome Locus At5g62990   Alleles in Database 2   See List OR Show All Identity Confidence Confirmed Alias Symbol   Gene Class Embryo Defective Predicted Function PORR Domain Protein Function Details Probable role in organellar RNA splicing or metabolism Gene Evidence Double Border Recovery Meinke / Syngenta (1 allele) Single Border Recovery Meinke / Salk (1 allele) Database Release March, 2002 Predicted Sequences Gene: 1485 nucleotides mRNA: 1485 nucleotides Protein:   494 amino acids cDNA Status FLcDNA Available: DQ447107 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Tomato (Lycopersicon esculentum) (68%) Model Genomes:   None Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 247410_at

Mutant Information Allele Symbol emb 1692-1 emb 1692-2 Mutant Class Embryo Defective Embryo Defective Source of Mutant Meinke / Syngenta Meinke / Salk Mutant Line Number 34817 SALK_044699 Ecotype Columbia Columbia Genetic Background     ABRC Stock CS16030 CS24071 Mutagen Treatment T-DNA T-DNA Insertion Mutant Yes   Details Yes   Details Flanking Sequence Details  (Help)   Location of Mutation Exon 1 Upstream Terminal Phenotype Transition  Details Transition  Details Nomarski Phenotype   Images   Images Allelism Evidence Reference Allele Complementation Test; Sequence Identity Database Release March, 2002 March, 2004 Seed Color White White Embryo Color White White Percent Mutant Seeds 25.1 % 25.3 % Chi - Square <0.1 0.1 Seeds Counted 1103 1235 Percent Top Half 48.8 % 53.0 % Chi - Square 0.3 1.2 Average Seed Length 490 ± 50 µm 500 ± 60 µm Average Embryo Length 110 ± 40 µm 130 ± 60 µm