OSU Syngenta vbi

SeedGenes Profile: EMB 1789

Gene Information
Gene Symbol EMB 1789
Chromosome Locus At5g56930   tair
Alleles in Database 3   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function Uncertain
Function Details Putative zinc finger domain
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Single Border Recovery
Meinke / Salk (2 alleles)
Database Release March, 2002
Predicted Sequences
Gene:2674 nucleotides
mRNA: 2085 nucleotides
Protein:  675 amino acids
cDNA Status FLcDNA Available: BX832581
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Brassica napus (74%)
Model Genomes:   None
Subcellular Localization TargetP Targeted to Mitochondria
Mutant Information
Allele Symbol emb 1789-3
Mutant Class Embryo Defective
Source of Mutant Meinke / Salk
Mutant Line Number SALK_034075
Ecotype Columbia
Genetic Background  
ABRC Stock CS24075
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence  
Location of Mutation Exon 7
Terminal Phenotype Globular  Details
Nomarski Phenotype   Images
Allelism Evidence Complementation Test; Sequence Identity
Database Release March, 2004
Seed Color Pale Yellow
Embryo Color Pale Yellow
Percent Mutant Seeds 22.4 %
Chi - Square 3.8
Seeds Counted 1075
Percent Top Half 46.1 %
Chi - Square 1.4
Average Seed Length 510 ± 50 µm
Average Embryo Length 80 ± 40 µm