OSU Syngenta vbi

SeedGenes Profile: EMB 1873

Gene Information
Gene Symbol EMB 1873
Chromosome Locus At5g08170   tair
Alleles in Database 3   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function Agmatine Iminohydrolase
Function Details Polyamine biosynthesis
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Single Border Recovery
Meinke / Salk (2 alleles)
Database Release September, 2002
Predicted Sequences
Gene:2771 nucleotides
mRNA: 1538 nucleotides
Protein:  383 amino acids
cDNA Status FLcDNA Available: AK118589
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Brassica napus (89%)
Model Genomes:   None
Subcellular Localization TargetP Not Targeted to Cell Compartment
mRNA Expression Data NASCArray Spot History for 250570_at
Mutant Information
Allele Symbol emb 1873-2
Mutant Class Embryo Defective
Source of Mutant Meinke / Salk
Mutant Line Number SALK_138993
Ecotype Columbia
Genetic Background  
ABRC Stock CS24077
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence  
Location of Mutation Exon 4
Terminal Phenotype Cotyledon  Details
Nomarski Phenotype   Images
Allelism Evidence Complementation Test; Sequence Identity
Database Release March, 2004
Seed Color Pale Green
Embryo Color Pale Green
Percent Mutant Seeds 25.7 %
Chi - Square 0.3
Seeds Counted 1137
Percent Top Half 58.9 %
Chi - Square 9.2
Average Seed Length 500 ± 50 µm
Average Embryo Length 370 ± 50 µm