Aug 17, 2018 4:41 PM
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Database Query
SeedGenes Profile: EMB 1873
Gene Information
Gene Symbol
EMB 1873
Chromosome Locus
At5g08170
Alleles in Database
3
See List
OR
Show All
Identity Confidence
Confirmed
Alias Symbol
Gene Class
Embryo Defective
Predicted Function
Agmatine Iminohydrolase
Function Details
Polyamine biosynthesis
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Single Border Recovery
Meinke / Salk (2 alleles)
Database Release
September, 2002
Predicted Sequences
Gene:
2771 nucleotides
mRNA:
1538 nucleotides
Protein:
383 amino acids
cDNA Status
FLcDNA Available:
AK118589
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Brassica napus (89%)
Model Genomes:
None
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
250570_at
Mutant Information
Allele Symbol
emb 1873-1
emb 1873-2
emb 1873-3
Mutant Class
Embryo Defective
Embryo Defective
Embryo Defective
Source of Mutant
Meinke / Syngenta
Meinke / Salk
Meinke / Salk
Mutant Line Number
43301
SALK_138993
SALK_020442
Ecotype
Columbia
Columbia
Columbia
Genetic Background
ABRC Stock
CS16128
CS24077
CS24078
Mutagen Treatment
T-DNA
T-DNA
T-DNA
Insertion Mutant
Yes
Details
Yes
Details
Yes
Details
Flanking Sequence
Details
(Help)
Location of Mutation
Intron 1
Exon 4
Exon 6
Terminal Phenotype
Cotyledon
Details
Cotyledon
Details
Cotyledon
Details
Nomarski Phenotype
Images
Images
Images
Allelism Evidence
Reference Allele
Complementation Test; Sequence Identity
Complementation Test; Sequence Identity
Database Release
September, 2002
March, 2004
March, 2004
Seed Color
Pale Yellow
Pale Green
Pale Green
Embryo Color
Pale Yellow
Pale Green
Pale Green
Percent Mutant Seeds
26.6 %
25.7 %
26.0 %
Chi - Square
1.4
0.3
0.5
Seeds Counted
1011
1137
1039
Percent Top Half
52.4 %
58.9 %
50.7 %
Chi - Square
0.6
9.2
0.1
Average Seed Length
470 ± 50 µm
500 ± 50 µm
520 ± 60 µm
Average Embryo Length
260 ± 80 µm
370 ± 50 µm
390 ± 50 µm