OSU Syngenta vbi

SeedGenes Profile: EMB 2220

Gene Information
Gene Symbol EMB 2220
Chromosome Locus At5g12840   tair
Alleles in Database 1
Identity Confidence Not Confirmed
Alias Symbol  
Gene Class 50% Defective Seeds
Predicted Function CCAAT Box Transcription Factor (Hap2A)
Function Details Regulation of transcription
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Database Release September, 2002
Predicted Sequences
Gene:2695 nucleotides
mRNA: 1275 nucleotides
Protein:  272 amino acids
cDNA Status FLcDNA Available: Y13720
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Brassica napus (77%)
Model Genomes:   None
Subcellular Localization TargetP Not Targeted to Cell Compartment
mRNA Expression Data NASCArray Spot History for 250320_at
Mutant Information
Allele Symbol emb 2220
Mutant Class 50% Defective Seeds
Source of Mutant Meinke / Syngenta
Mutant Line Number 70913
Ecotype Columbia
Genetic Background qrt
ABRC Stock CS16131
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence Details  (Help)
Location of Mutation Exon 1 in 5' UTR
Terminal Phenotype Cotyledon  Details
Nomarski Phenotype   Images
Allelism Evidence Reference Allele
Database Release September, 2002
Seed Color White to Pale Yellow
Embryo Color White to Pale Yellow
Percent Mutant Seeds 48.1 %
Chi - Square 0.8
Seeds Counted 559
Percent Top Half 48.7 %
Chi - Square 0.2
Average Seed Length 550 ± 60 µm
Average Embryo Length 70 ± 80 µm