Aug 17, 2018 4:33 PM
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Database Query
SeedGenes Profile: EMB 2220
Gene Information
Gene Symbol
EMB 2220
Chromosome Locus
At5g12840
Alleles in Database
1
Identity Confidence
Not Confirmed
Alias Symbol
Gene Class
50% Defective Seeds
Predicted Function
CCAAT Box Transcription Factor (Hap2A)
Function Details
Regulation of transcription
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Database Release
September, 2002
Predicted Sequences
Gene:
2695 nucleotides
mRNA:
1275 nucleotides
Protein:
272 amino acids
cDNA Status
FLcDNA Available:
Y13720
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Brassica napus (77%)
Model Genomes:
None
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
250320_at
Mutant Information
Allele Symbol
emb 2220
Mutant Class
50% Defective Seeds
Source of Mutant
Meinke / Syngenta
Mutant Line Number
70913
Ecotype
Columbia
Genetic Background
qrt
ABRC Stock
CS16131
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Details
(Help)
Location of Mutation
Exon 1 in 5' UTR
Terminal Phenotype
Cotyledon
Details
Nomarski Phenotype
Images
Allelism Evidence
Reference Allele
Database Release
September, 2002
Seed Color
White to Pale Yellow
Embryo Color
White to Pale Yellow
Percent Mutant Seeds
48.1 %
Chi - Square
0.8
Seeds Counted
559
Percent Top Half
48.7 %
Chi - Square
0.2
Average Seed Length
550 ± 60 µm
Average Embryo Length
70 ± 80 µm