Aug 17, 2018 4:33 PM
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Database Query
SeedGenes Profile: EMB 2247
Gene Information
Gene Symbol
EMB 2247
Chromosome Locus
At5g16715
Alleles in Database
2
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Identity Confidence
Confirmed
Alias Symbol
Gene Class
Embryo Defective
Predicted Function
Valine tRNA Synthetase
Function Details
Translation in chloroplast
Gene Evidence
Double Border Recovery
Meinke / Syngenta (2 alleles)
Database Release
September, 2003
Predicted Sequences
Gene:
8168 nucleotides
mRNA:
3204 nucleotides
Protein:
970 amino acids
cDNA Status
FLcDNA Available:
BX830792
Top BLAST Hits
Arabidopsis
:
AT1G14610.1 (39%)
Plant ESTs:
Rice (Oryza sativa) (77%)
Model Genomes:
Synechocystis (43%)
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
246509_at
Mutant Information
Allele Symbol
emb 2247-2
Mutant Class
Embryo Defective
Source of Mutant
Meinke / Syngenta
Mutant Line Number
67816
Ecotype
Columbia
Genetic Background
qrt
ABRC Stock
CS16213
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Details
(Help)
Location of Mutation
Exon 4 to Intron 4
Terminal Phenotype
Globular
Details
Nomarski Phenotype
Images
Allelism Evidence
Complementation Test; Sequence Identity
Database Release
September, 2003
Seed Color
White
Embryo Color
White
Percent Mutant Seeds
27.7 %
Chi - Square
4.1
Seeds Counted
1084
Percent Top Half
51.7 %
Chi - Square
0.3
Average Seed Length
520 ± 60 µm
Average Embryo Length
70 ± 30 µm