SeedGenes Profile: EMB 2407

Gene Information Gene Symbol EMB 2407 Chromosome Locus At5g60540   Alleles in Database 3   See List OR Show All Identity Confidence Confirmed Alias Symbol PDX 2 (T. Fitzpatrick) Sequence Identity Gene Class Embryo Defective Predicted Function Imidazoleglycerol-Phosphate Synthase Subunit H; Pyroxidine Amidotransferase Function Details Pyroxidine (vitamin B6) biosynthesis Gene Evidence Double Border Recovery Meinke / Syngenta (1 allele) Border Recovery Fitzpatrick / Salk (1 allele) Border Recovery Fitzpatrick / Riken (1 allele) Database Release September, 2003 Predicted Sequences Gene: 2180 nucleotides mRNA: 1174 nucleotides Protein:   255 amino acids cDNA Status FLcDNA Available: AK117313 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Brassica napus (91%) Model Genomes:   Neurospora crassa (44%) Subcellular Localization TargetP Targeted to Mitochondria SUBA mRNA Expression Data NASCArray Spot History for 247641_at

Mutant Information Allele Symbol pdx 2-2 Mutant Class Embryo Defective Source of Mutant Fitzpatrick / Riken Mutant Line Number RATM53-2381-1 Ecotype Nossen Genetic Background   ABRC Stock   Mutagen Treatment Transposon Insertion Mutant Yes   Details Flanking Sequence   Location of Mutation Intron 1 Terminal Phenotype Globular Nomarski Phenotype   Allelism Evidence Sequence Identity Database Release October, 2007 Seed Color   Embryo Color   Percent Mutant Seeds   Chi - Square   Seeds Counted   Percent Top Half   Chi - Square   Average Seed Length   Average Embryo Length