OSU Syngenta vbi

SeedGenes Profile: EMB 2597

Gene Information
Gene Symbol EMB 2597
Chromosome Locus At4g13750   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol NOV (K. Okada) Sequence Identity
Gene Class Embryo Defective
Predicted Function Uncertain
Function Details Plant-specific nuclear protein
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Single Border Recovery
Meinke / Salk (1 allele)
Database Release September, 2003
Predicted Sequences
Gene:12430 nucleotides
mRNA: 8252 nucleotides
Protein:  2729 amino acids
cDNA Status EST Identified: BX828204
Top BLAST Hits
Arabidopsis: AT1G08300.1 (65%)
Plant ESTs: Soybean (Glycine max) (46%)
Model Genomes:  Danio rerio (28%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
mRNA Expression Data NASCArray Spot History for 254731_at
Mutant Information
Allele Symbol emb 2597-2
Mutant Class Embryo Defective
Source of Mutant Meinke / Salk
Mutant Line Number SALK_096246
Ecotype Columbia
Genetic Background  
ABRC Stock CS24087
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence  
Location of Mutation Exon 1
Terminal Phenotype Cotyledon  Details
Nomarski Phenotype   Images
Allelism Evidence Complementation Test; Sequence Identity
Database Release March, 2004
Seed Color White
Embryo Color White
Percent Mutant Seeds 25.7 %
Chi - Square 0.4
Seeds Counted 1197
Percent Top Half 55.5 %
Chi - Square 3.8
Average Seed Length 420 ± 70 µm
Average Embryo Length 120 ± 120 µm