Aug 17, 2018 4:41 PM
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Database Query
SeedGenes Profile: EMB 2597
Gene Information
Gene Symbol
EMB 2597
Chromosome Locus
At4g13750
Alleles in Database
2
See List
OR
Show All
Identity Confidence
Confirmed
Alias Symbol
NOV
(K. Okada) Sequence Identity
Gene Class
Embryo Defective
Predicted Function
Uncertain
Function Details
Plant-specific nuclear protein
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Single Border Recovery
Meinke / Salk (1 allele)
Database Release
September, 2003
Predicted Sequences
Gene:
12430 nucleotides
mRNA:
8252 nucleotides
Protein:
2729 amino acids
cDNA Status
EST Identified:
BX828204
Top BLAST Hits
Arabidopsis
:
AT1G08300.1 (65%)
Plant ESTs:
Soybean (Glycine max) (46%)
Model Genomes:
Danio rerio (28%)
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
254731_at
Mutant Information
Allele Symbol
emb 2597-1
emb 2597-2
Mutant Class
Embryo Defective
Embryo Defective
Source of Mutant
Meinke / Syngenta
Meinke / Salk
Mutant Line Number
124146
SALK_096246
Ecotype
Columbia
Columbia
Genetic Background
ABRC Stock
CS16217
CS24087
Mutagen Treatment
T-DNA
T-DNA
Insertion Mutant
Yes
Details
Yes
Details
Flanking Sequence
Details
(Help)
Location of Mutation
Upstream to Exon 1
Exon 1
Terminal Phenotype
Cotyledon
Details
Cotyledon
Details
Nomarski Phenotype
Images
Images
Allelism Evidence
Reference Allele
Complementation Test; Sequence Identity
Database Release
September, 2003
March, 2004
Seed Color
White to Pale Yellow
White
Embryo Color
White to Pale Yellow
White
Percent Mutant Seeds
23.0 %
25.7 %
Chi - Square
2.2
0.4
Seeds Counted
1031
1197
Percent Top Half
52.3 %
55.5 %
Chi - Square
0.5
3.8
Average Seed Length
410 ± 80 µm
420 ± 70 µm
Average Embryo Length
110 ± 110 µm
120 ± 120 µm