OSU Syngenta vbi

SeedGenes Profile: EMB 2719

Gene Information
Gene Symbol EMB 2719
Chromosome Locus At1g20200   tair
Alleles in Database 1
Identity Confidence Not Confirmed
Alias Symbol HAP 15 (M. Johnson) Alternate Name
Gene Class Embryo Defective
Predicted Function 26S Proteasome Regulatory Subunit (RPN3)
Function Details Component of 26S proteasome lid
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Database Release September, 2002
Predicted Sequences
Gene:3218 nucleotides
mRNA: 1804 nucleotides
Protein:  488 amino acids
cDNA Status FLcDNA Available: AY088940
Top BLAST Hits
Arabidopsis: AT1G75990.1 (91%)
Plant ESTs: Vitis vinifera (82%)
Model Genomes:  Danio rerio (45%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
SUBA
mRNA Expression Data NASCArray Spot History for 261227_at
    
Mutant Information
Allele Symbol emb 2719
Mutant Class Embryo Defective
Source of Mutant Meinke / Syngenta
Mutant Line Number 65310
Ecotype Columbia
Genetic Background qrt
ABRC Stock CS16089
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence Details  (Help)
Location of Mutation Exon 3 to Intron 3
Terminal Phenotype Cotyledon  Details
Nomarski Phenotype   Images
Allelism Evidence Reference Allele
Database Release September, 2002
Seed Color Pale Yellow
Embryo Color Pale Yellow
Percent Mutant Seeds 7.0 %
Chi - Square 279.5
Seeds Counted 1610
Percent Top Half 88.3 %
Chi - Square 66.0
Average Seed Length 520 ± 70 µm
Average Embryo Length 220 ± 160 µm