SeedGenes Profile: EMB 2730

Gene Information Gene Symbol EMB 2730 Chromosome Locus At5g02250   Alleles in Database 5   See List OR Show All Identity Confidence Confirmed Alias Symbol RNR 1 (D. Stern) Sequence Identity RNR 1 (D. Stern) Complemetation Test Gene Class Embryo Defective Predicted Function Ribonuclease II Family Protein Function Details 3' to 5' exoribonuclease; Maturation of chloroplast rRNAs Gene Evidence Double Border Recovery Meinke / Syngenta (1 allele) Border Recovery Meinke / Salk (1 allele) Border Recovery Stern / Salk (2 alleles) Border Recovery Meinke; Stern / Salk (1 allele) Database Release September, 2002 Predicted Sequences Gene: 4745 nucleotides mRNA: 2911 nucleotides Protein:   803 amino acids cDNA Status FLcDNA Available: AK176383 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Rice (Oryza sativa) (58%) Model Genomes:   Synechocystis (37%) Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 251040_at

Mutant Information Allele Symbol rnr 1-2 Mutant Class Seed Pigment Source of Mutant Stern / Salk Mutant Line Number SALK_044726 Ecotype Columbia Genetic Background   ABRC Stock   Mutagen Treatment T-DNA Insertion Mutant Yes   Details Flanking Sequence   Location of Mutation Intron 12 Terminal Phenotype Pigment Defective Nomarski Phenotype   Allelism Evidence Sequence Identity Database Release October, 2007 Seed Color   Embryo Color   Percent Mutant Seeds   Chi - Square   Seeds Counted   Percent Top Half   Chi - Square   Average Seed Length   Average Embryo Length