Aug 17, 2018 4:33 PM
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Database Query
SeedGenes Profile: EMB 2746
Gene Information
Gene Symbol
EMB 2746
Chromosome Locus
At5g63420
Alleles in Database
2
See List
OR
Show All
Identity Confidence
Confirmed
Alias Symbol
Gene Class
Embryo Defective
Predicted Function
Metallo-Beta-Lactamase Family Protein
Function Details
Putative chloroplast RNA endounclease (Rnase J)
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Single Border Recovery
Meinke / Salk (1 allele)
Database Release
March, 2003
Predicted Sequences
Gene:
5583 nucleotides
mRNA:
3026 nucleotides
Protein:
911 amino acids
cDNA Status
FLcDNA Available:
AK221272
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Vitis vinifera (70%)
Model Genomes:
Synechocystis (33%)
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
247385_at
Mutant Information
Allele Symbol
emb 2746-2
Mutant Class
Embryo Defective
Source of Mutant
Meinke / Salk
Mutant Line Number
SALK_110582
Ecotype
Columbia
Genetic Background
ABRC Stock
CS24091
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Intron 7
Terminal Phenotype
Globular
Details
Nomarski Phenotype
Images
Allelism Evidence
Complementation Test; Sequence Identity
Database Release
March, 2004
Seed Color
White
Embryo Color
White
Percent Mutant Seeds
24.0 %
Chi - Square
0.5
Seeds Counted
1124
Percent Top Half
49.6 %
Chi - Square
<0.1
Average Seed Length
500 ± 60 µm
Average Embryo Length
70 ± 30 µm