OSU Syngenta vbi

SeedGenes Profile: EMB 2773

Gene Information
Gene Symbol EMB 2773
Chromosome Locus At5g15540   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol AtSCC 2 (I. Siddiqi) Sequence Identity
Gene Class Embryo Defective
Predicted Function Adherin (AtSCC2)
Function Details Sister chromatid cohesion
Gene Evidence
Single Border Recovery
Meinke / Salk (2 alleles)
Database Release October, 2007
Predicted Sequences
Gene:9739 nucleotides
mRNA: 5482 nucleotides
Protein:  1755 amino acids
cDNA Status FLcDNA Available: EF520004
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Rice (Oryza sativa) (54%)
Model Genomes:  Homo sapiens (26%)
Subcellular Localization TargetP Targeted to Chloroplasts
mRNA Expression Data NASCArray Spot History for 246558_at
Mutant Information
Allele Symbol emb 2773-1
Mutant Class Embryo Defective
Source of Mutant Meinke / Salk
Mutant Line Number SALK_151609
Ecotype Columbia
Genetic Background  
ABRC Stock  
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence  
Location of Mutation Exon 9
Terminal Phenotype Preglobular  Details
Nomarski Phenotype Preglobular  Images
Allelism Evidence Reference Allele
Database Release October, 2007
Seed Color White
Embryo Color White
Percent Mutant Seeds 24.6 %
Chi - Square 0.1
Seeds Counted 1112
Percent Top Half 53.8 %
Chi - Square 1.6
Average Seed Length 470 ± 100 µm
Average Embryo Length 20 ± 40 µm