SeedGenes Profile: EMB 2776

Gene Information Gene Symbol EMB 2776 Chromosome Locus At2g41500   Alleles in Database 3   See List OR Show All Identity Confidence Confirmed Alias Symbol LIS (U. Grossniklaus) Sequence Identity PRP 4 (S. Hoth) Sequence Identity Gene Class Embryo Defective Predicted Function U4/U6 snRNP (Prp4) Function Details Proposed role in pre-mRNA splicing Gene Evidence Molecular Complementation S. Hoth (1 allele) Border Recovery Meinke; Grossniklaus; Hoth / Sal (1 allele) Sequenced Mutant Allele U. Grossniklaus (1 allele) Molecular Complementation U. Grossniklaus (1 allele) Border Recovery Hoth / WiscDsLox (1 allele) Database Release October, 2007 Predicted Sequences Gene: 3297 nucleotides mRNA: 2060 nucleotides Protein:   554 amino acids cDNA Status FLcDNA Available: AK229530 Top BLAST Hits Arabidopsis: AT2G05720.1 (50%) Plant ESTs: Vitis vinifera (69%) Model Genomes:   Danio rerio (44%) Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 267102_at

Mutant Information Allele Symbol emb 2776 Mutant Class Embryo Defective Source of Mutant Meinke; Hoth; Grossniklaus / Sa Mutant Line Number SALK_070009 Ecotype Columbia Genetic Background   ABRC Stock   Mutagen Treatment T-DNA Insertion Mutant Yes   Details Flanking Sequence   Location of Mutation Intron 2 Terminal Phenotype Preglobular  Details Nomarski Phenotype   Allelism Evidence Reference Allele Database Release October, 2007 Seed Color White Embryo Color White Percent Mutant Seeds 14.2 % Chi - Square 53.2 Seeds Counted 863 Percent Top Half 39.8 % Chi - Square 5.1 Average Seed Length 460 ± 110 µm Average Embryo Length 30 ± 30 µm