Aug 17, 2018 4:33 PM
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Database Query
SeedGenes Profile: EMB 2781
Gene Information
Gene Symbol
EMB 2781
Chromosome Locus
At1g04950
Alleles in Database
2
See List
OR
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Identity Confidence
Confirmed
Alias Symbol
AtTAF 6
(M. Kater) Sequence Identity
Gene Class
Embryo Defective
Predicted Function
TATA Box Binding Protein
Function Details
Regulation of transcription
Gene Evidence
Border Recovery
Meinke / Salk (2 alleles)
Database Release
December, 2010
Predicted Sequences
Gene:
4384 nucleotides
mRNA:
2192 nucleotides
Protein:
549 amino acids
cDNA Status
FLcDNA Available:
AY050962
Top BLAST Hits
Arabidopsis
:
AT1G54360.1 (42%)
Plant ESTs:
Brassica napus (90%)
Model Genomes:
Schizosaccharomyces pombe (43%)
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
261126_at
Mutant Information
Allele Symbol
emb 2781-1
Mutant Class
Embryo Defective
Source of Mutant
Meinke / Salk
Mutant Line Number
SALK_038879
Ecotype
Columbia
Genetic Background
ABRC Stock
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Intron 10
Terminal Phenotype
Preglobular
Details
Nomarski Phenotype
Images
Allelism Evidence
Reference Allele
Database Release
December, 2010
Seed Color
White
Embryo Color
White
Percent Mutant Seeds
22.4 %
Chi - Square
0.9
Seeds Counted
250
Percent Top Half
58.9 %
Chi - Square
1.8
Average Seed Length
340 ± 60 µm
Average Embryo Length
15 ± 0 µm