OSU Syngenta vbi

SeedGenes Profile: EMB 2781

Gene Information
Gene Symbol EMB 2781
Chromosome Locus At1g04950   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol AtTAF 6 (M. Kater) Sequence Identity
Gene Class Embryo Defective
Predicted Function TATA Box Binding Protein
Function Details Regulation of transcription
Gene Evidence
Border Recovery
Meinke / Salk (2 alleles)
Database Release December, 2010
Predicted Sequences
Gene:4384 nucleotides
mRNA: 2192 nucleotides
Protein:  549 amino acids
cDNA Status FLcDNA Available: AY050962
Top BLAST Hits
Arabidopsis: AT1G54360.1 (42%)
Plant ESTs: Brassica napus (90%)
Model Genomes:  Schizosaccharomyces pombe (43%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
mRNA Expression Data NASCArray Spot History for 261126_at
Mutant Information
Allele Symbol emb 2781-2
Mutant Class Embryo Defective
Source of Mutant Meinke / Salk
Mutant Line Number SALK_137678
Ecotype Columbia
Genetic Background  
ABRC Stock  
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence  
Location of Mutation Intron 10
Terminal Phenotype Preglobular  Details
Nomarski Phenotype   Images
Allelism Evidence Complementation Test; Sequence Identity
Database Release December, 2010
Seed Color White to Pale Yellow
Embryo Color White to Pale Yellow
Percent Mutant Seeds 25.6 %
Chi - Square <0.1
Seeds Counted 215
Percent Top Half 52.7 %
Chi - Square 0.2
Average Seed Length 520 ± 30 µm
Average Embryo Length 15 ± 0 µm