Aug 17, 2018 4:33 PM
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Database Query
SeedGenes Profile: EMB 2782
Gene Information
Gene Symbol
EMB 2782
Chromosome Locus
At5g15920
Alleles in Database
2
See List
OR
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Identity Confidence
Confirmed
Alias Symbol
Gene Class
Embryo Defective
Predicted Function
SMC Family Protein (MSS2)
Function Details
Chromosome dynamics (SMC5)
Gene Evidence
Border Recovery
Meinke / Salk (2 alleles)
Database Release
December, 2010
Predicted Sequences
Gene:
3877 nucleotides
mRNA:
3279 nucleotides
Protein:
1053 amino acids
cDNA Status
EST Identified
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Rice (Oryza sativa) (59%)
Model Genomes:
Homo sapiens (32%)
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
246536_at
Mutant Information
Allele Symbol
emb 2782-1
Mutant Class
Embryo Defective
Source of Mutant
Meinke / Salk
Mutant Line Number
SALK_107583
Ecotype
Columbia
Genetic Background
ABRC Stock
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Exon 1
Terminal Phenotype
Preglobular
Details
Nomarski Phenotype
Images
Allelism Evidence
Reference Allele
Database Release
December, 2010
Seed Color
White to Pale Yellow
Embryo Color
White to Pale Yellow
Percent Mutant Seeds
23.3 %
Chi - Square
0.4
Seeds Counted
275
Percent Top Half
56.2 %
Chi - Square
1
Average Seed Length
490 ± 100 µm
Average Embryo Length
40 ± 80 µm