OSU Syngenta vbi

SeedGenes Profile: EMB 2782

Gene Information
Gene Symbol EMB 2782
Chromosome Locus At5g15920   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function SMC Family Protein (MSS2)
Function Details Chromosome dynamics (SMC5)
Gene Evidence
Border Recovery
Meinke / Salk (2 alleles)
Database Release December, 2010
Predicted Sequences
Gene:3877 nucleotides
mRNA: 3279 nucleotides
Protein:  1053 amino acids
cDNA Status EST Identified
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Rice (Oryza sativa) (59%)
Model Genomes:  Homo sapiens (32%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
mRNA Expression Data NASCArray Spot History for 246536_at
Mutant Information
Allele Symbol emb 2782-1
Mutant Class Embryo Defective
Source of Mutant Meinke / Salk
Mutant Line Number SALK_107583
Ecotype Columbia
Genetic Background  
ABRC Stock  
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence  
Location of Mutation Exon 1
Terminal Phenotype Preglobular  Details
Nomarski Phenotype   Images
Allelism Evidence Reference Allele
Database Release December, 2010
Seed Color White to Pale Yellow
Embryo Color White to Pale Yellow
Percent Mutant Seeds 23.3 %
Chi - Square 0.4
Seeds Counted 275
Percent Top Half 56.2 %
Chi - Square 1
Average Seed Length 490 ± 100 µm
Average Embryo Length 40 ± 80 µm