OSU Syngenta vbi

SeedGenes Profile: EMB 2782

Gene Information
Gene Symbol EMB 2782
Chromosome Locus At5g15920   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function SMC Family Protein (MSS2)
Function Details Chromosome dynamics (SMC5)
Gene Evidence
Border Recovery
Meinke / Salk (2 alleles)
Database Release December, 2010
Predicted Sequences
Gene:3877 nucleotides
mRNA: 3279 nucleotides
Protein:  1053 amino acids
cDNA Status EST Identified
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Rice (Oryza sativa) (59%)
Model Genomes:  Homo sapiens (32%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
mRNA Expression Data NASCArray Spot History for 246536_at
Mutant Information
Allele Symbol emb 2782-2
Mutant Class Embryo Defective
Source of Mutant Meinke / Salk
Mutant Line Number SALK_092081
Ecotype Columbia
Genetic Background  
ABRC Stock  
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence  
Location of Mutation Exon 1
Terminal Phenotype Preglobular  Details
Nomarski Phenotype   Images
Allelism Evidence Complementation Test; Sequence Identity
Database Release December, 2010
Seed Color White to Pale Yellow
Embryo Color White to Pale Yellow
Percent Mutant Seeds 28.4 %
Chi - Square 1.4
Seeds Counted 229
Percent Top Half 49.2 %
Chi - Square <0.1
Average Seed Length 490 ± 110 µm
Average Embryo Length 30 ± 60 µm