SeedGenes Profile: EMB 2788

Gene Information Gene Symbol EMB 2788 Chromosome Locus At4g27010   Alleles in Database 2   See List OR Show All Identity Confidence Confirmed Alias Symbol   Gene Class Embryo Defective Predicted Function Uncertain Function Details Weak similarity to ribosome biogenesis factor (URB1) Gene Evidence Border Recovery Meinke / Salk (2 alleles) Database Release December, 2010 Predicted Sequences Gene: 9831 nucleotides mRNA: 7692 nucleotides Protein:   2563 amino acids cDNA Status Unknown Top BLAST Hits Arabidopsis: AT1G72270.1 (71%) Plant ESTs: Vitis vinifera (45%) Model Genomes:   None Subcellular Localization TargetP Not Targeted to Cell Compartment SUBA mRNA Expression Data NASCArray Spot History for 253942_at

Mutant Information Allele Symbol emb 2788-1 emb 2788-2 Mutant Class Embryo Defective Embryo Defective Source of Mutant Meinke / Salk Meinke / Salk Mutant Line Number SALK_007803 SALK_002007 Ecotype Columbia Columbia Genetic Background     ABRC Stock     Mutagen Treatment T-DNA T-DNA Insertion Mutant Yes   Details Yes   Details Flanking Sequence     Location of Mutation Exon 1 Exon 2 Terminal Phenotype Cotyledon  Details Cotyledon  Details Nomarski Phenotype   Images   Images Allelism Evidence Reference Allele Complementation Test; Sequence Identity Database Release December, 2010 December, 2010 Seed Color Pale Green Pale Green Embryo Color Pale Green Pale Green Percent Mutant Seeds 27.2 % 27.7 % Chi - Square 0.9 1.2 Seeds Counted 327 310 Percent Top Half 41.6 % 51.2 % Chi - Square 2.5 <0.1 Average Seed Length 520 ± 40 µm 540 ± 30 µm Average Embryo Length 280 ± 90 µm 330 ± 110 µm