OSU Syngenta vbi

SeedGenes Profile: EMB 2789

Gene Information
Gene Symbol EMB 2789
Chromosome Locus At5g05680   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol MOS 7 (X. Li) Sequence Identity
Gene Class Embryo Defective
Predicted Function Nuclear Envelope Protein (Nup88)
Function Details Nuclear protein export
Gene Evidence
Border Recovery
Meinke / Salk (2 alleles)
Database Release December, 2010
Predicted Sequences
Gene:4376 nucleotides
mRNA: 2698 nucleotides
Protein:  810 amino acids
cDNA Status FLcDNA Available: AK229039
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Brassica napus (87%)
Model Genomes:   None
Subcellular Localization TargetP Not Targeted to Cell Compartment
mRNA Expression Data NASCArray Spot History for 250769_at
Mutant Information
Allele Symbol emb 2789-1
Mutant Class Embryo Defective
Source of Mutant Meinke / Salk
Mutant Line Number SALK_085349
Ecotype Columbia
Genetic Background  
ABRC Stock  
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence  
Location of Mutation Exon 6
Terminal Phenotype Preglobular  Details
Nomarski Phenotype   Images
Allelism Evidence Reference Allele
Database Release December, 2010
Seed Color White to Pale Yellow
Embryo Color White to Pale Yellow
Percent Mutant Seeds 28.3 %
Chi - Square 1.5
Seeds Counted 254
Percent Top Half 47.2 %
Chi - Square 0.2
Average Seed Length 490 ± 40 µm
Average Embryo Length 20 ± 20 µm