SeedGenes Profile: EMB 2790

Gene Information Gene Symbol EMB 2790 Chromosome Locus At5g56290   Alleles in Database 2   See List OR Show All Identity Confidence Confirmed Alias Symbol   Gene Class Embryo Defective Predicted Function Peroxisome Targeting Function Details Peroxisomal protein translocation Gene Evidence Border Recovery Meinke / Salk (2 alleles) Database Release December, 2010 Predicted Sequences Gene: 5656 nucleotides mRNA: 2525 nucleotides Protein:   728 amino acids cDNA Status FLcDNA Available: AY056299 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Brassica napus (93%) Model Genomes:   Homo sapiens (34%) Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 248010_at

Mutant Information Allele Symbol emb 2790-1 emb 2790-2 Mutant Class Embryo Defective Embryo Defective Source of Mutant Meinke / Salk Meinke / Salk Mutant Line Number SALK_018579 SALK_124577 Ecotype Columbia Columbia Genetic Background     ABRC Stock     Mutagen Treatment T-DNA T-DNA Insertion Mutant Yes   Details Yes   Details Flanking Sequence     Location of Mutation Exon 12 Exon 5 Terminal Phenotype Preglobular  Details Not Available Nomarski Phenotype   Images Allelism Evidence Reference Allele Complementation Test; Sequence Identity Database Release December, 2010 December, 2010 Seed Color Pale Yellow   Embryo Color Pale Yellow   Percent Mutant Seeds 17.4 %   Chi - Square 9.8   Seeds Counted 321   Percent Top Half 57.1 %   Chi - Square 1.1   Average Seed Length 360 ± 140 µm   Average Embryo Length 50 ± 60 µm