OSU Syngenta vbi

SeedGenes Profile: EMB 2793

Gene Information
Gene Symbol EMB 2793
Chromosome Locus At1g24706   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function THO/TREX Complex Component (THO2)
Function Details Transcription elongation; mRNP biogenesis; genome integrity
Gene Evidence
Border Recovery
Meinke / Salk (2 alleles)
Database Release December, 2010
Predicted Sequences
Gene:13619 nucleotides
mRNA: 5913 nucleotides
Protein:  1804 amino acids
cDNA Status EST Identified
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Rice (Oryza sativa) (53%)
Model Genomes:  Homo sapiens (35%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
mRNA Expression Data NASCArray Spot History for 245647_at
Mutant Information
Allele Symbol emb 2793-1
Mutant Class Embryo Defective
Source of Mutant Meinke / Salk
Mutant Line Number SALK_130342
Ecotype Columbia
Genetic Background  
ABRC Stock  
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence  
Location of Mutation Exon 17
Terminal Phenotype Cotyledon  Details
Nomarski Phenotype   Images
Allelism Evidence Reference Allele
Database Release December, 2010
Seed Color Pale Green
Embryo Color Pale Green
Percent Mutant Seeds 21.6 %
Chi - Square 1.8
Seeds Counted 292
Percent Top Half 50.8 %
Chi - Square <0.1
Average Seed Length 520 ± 50 µm
Average Embryo Length 360 ± 90 µm