OSU Syngenta vbi

SeedGenes Profile: EMB 2793

Gene Information
Gene Symbol EMB 2793
Chromosome Locus At1g24706   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function THO/TREX Complex Component (THO2)
Function Details Transcription elongation; mRNP biogenesis; genome integrity
Gene Evidence
Border Recovery
Meinke / Salk (2 alleles)
Database Release December, 2010
Predicted Sequences
Gene:13619 nucleotides
mRNA: 5913 nucleotides
Protein:  1804 amino acids
cDNA Status EST Identified
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Rice (Oryza sativa) (53%)
Model Genomes:  Homo sapiens (35%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
mRNA Expression Data NASCArray Spot History for 245647_at
Mutant Information
Allele Symbol emb 2793-2
Mutant Class Embryo Defective
Source of Mutant Meinke / Salk
Mutant Line Number SALK_072011
Ecotype Columbia
Genetic Background  
ABRC Stock  
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence  
Location of Mutation Exon 15
Terminal Phenotype Cotyledon  Details
Nomarski Phenotype   Images
Allelism Evidence Complementation Test; Sequence Identity
Database Release December, 2010
Seed Color Pale Green
Embryo Color Pale Green
Percent Mutant Seeds 23.3 %
Chi - Square 0.4
Seeds Counted 283
Percent Top Half 59.1 %
Chi - Square 2.2
Average Seed Length 470 ± 110 µm
Average Embryo Length 260 ± 160 µm