OSU Syngenta vbi

SeedGenes Profile: EMB 2811

Gene Information
Gene Symbol EMB 2811
Chromosome Locus At1g63160   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function DNA Replication Factor (RFC5)
Function Details DNA replication
Gene Evidence
Border Recovery
Meinke / GABI (1 allele)
Border Recovery
Meinke / SAIL (1 allele)
Database Release December, 2010
Predicted Sequences
Gene:1965 nucleotides
mRNA: 1263 nucleotides
Protein:  333 amino acids
cDNA Status FLcDNA Available: BX813429
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Brassica napus (94%)
Model Genomes:  Homo sapiens (67%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
SUBA
mRNA Expression Data NASCArray Spot History for 259690_at
    
Mutant Information
Allele Symbol emb 2811-1emb 2811-2
Mutant Class Embryo DefectiveEmbryo Defective
Source of Mutant Meinke / GABIMeinke / SAIL
Mutant Line Number GABI_117E01SAIL_6_C02
Ecotype ColumbiaColumbia
Genetic Background   
ABRC Stock   
Mutagen Treatment T-DNAT-DNA
Insertion Mutant Yes   DetailsYes   Details
Flanking Sequence   
Location of Mutation Exon 5Exon 4
Terminal Phenotype PreglobularPreglobular
Nomarski Phenotype
Allelism Evidence Reference AlleleComplementation Test; Sequence Identity
Database Release December, 2010December, 2010
Seed Color   
Embryo Color   
Percent Mutant Seeds 26.9 %24.2 %
Chi - Square 0.80.2
Seeds Counted 416627
Percent Top Half   
Chi - Square   
Average Seed Length   
Average Embryo Length