OSU Syngenta vbi

SeedGenes Profile: EMB 30

Gene Information
Gene Symbol EMB 30
Chromosome Locus At1g13980   tair
Alleles in Database 3   See List OR Show All
Identity Confidence Confirmed
Alias Symbol GN (G. Jurgens) Sequence Identity
Gene Class Embryo Defective
Predicted Function ARF Guanine Exchange Factor
Function Details Large membrane-associated ARF GEF; role in vesicle trafficking and cell polarity
Gene Evidence
Sequenced Mutant Allele
D. Shevell (1 allele)
Border Recovery
D. Shevell (1 allele)
Sequenced Mutant Allele
G. Jurgens (1 allele)
Database Release March, 2002
Predicted Sequences
Gene:6096 nucleotides
mRNA: 4835 nucleotides
Protein:  1451 amino acids
cDNA Status FLcDNA Available: U36432
Top BLAST Hits
Arabidopsis: AT5G39500.1 (62%)
Plant ESTs: Vitis vinifera (83%)
Model Genomes:  Caenorhabditis elegans (31%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
mRNA Expression Data NASCArray Spot History for 262614_at
Mutant Information
Allele Symbol gnom
Mutant Class Embryo Defective
Source of Mutant G. Jurgens
Mutant Line Number T391
Ecotype Landsberg erecta
Genetic Background  
ABRC Stock  
Mutagen Treatment EMS
Insertion Mutant No
Flanking Sequence  
Location of Mutation Exon 3
Terminal Phenotype Cotyledon  Details
Nomarski Phenotype   Images
Allelism Evidence Complementation Test; Sequence Identity
Database Release March, 2002
Seed Color Green
Embryo Color Green
Percent Mutant Seeds 25.5 %
Chi - Square <0.1
Seeds Counted 1040
Percent Top Half 49.8 %
Chi - Square <0.1
Average Seed Length 430 ± 40 µm
Average Embryo Length 280 ± 90 µm