SeedGenes Profile: EMB 3123

Gene Information Gene Symbol EMB 3123 Chromosome Locus At3g27750   Alleles in Database 2   See List OR Show All Identity Confidence Confirmed Alias Symbol   Gene Class Embryo Defective Predicted Function Uncertain Function Details VPS9 domain protein Gene Evidence Border Recovery Myouga / Riken (1 allele) Border Recovery Meinke / Salk (1 allele) Database Release December, 2010 Predicted Sequences Gene: 1067 nucleotides mRNA: 1067 nucleotides Protein:   222 amino acids cDNA Status FLcDNA Available: AF375402 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Brassica napus (71%) Model Genomes:   None Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 258232_at

Mutant Information Allele Symbol emb 3123-2 Mutant Class Seed Pigment Source of Mutant Meinke / Salk Mutant Line Number SALK_140334 Ecotype Columbia Genetic Background   ABRC Stock   Mutagen Treatment T-DNA Insertion Mutant Yes   Details Flanking Sequence   Location of Mutation Exon 1 Terminal Phenotype Pigment Defective Nomarski Phenotype   Allelism Evidence Complementation Test; Sequence Identity Database Release December, 2010 Seed Color   Embryo Color   Percent Mutant Seeds 21.2 % Chi - Square 2.4 Seeds Counted 321 Percent Top Half   Chi - Square   Average Seed Length   Average Embryo Length