OSU Syngenta vbi

SeedGenes Profile: EMB 3126

Gene Information
Gene Symbol EMB 3126
Chromosome Locus At3g63490   tair
Alleles in Database 3   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function Chloroplast 50S Ribosomal Protein L1
Function Details Translation in chloroplast
Gene Evidence
Border Recovery
Myouga / Riken (1 allele)
Border Recovery
Myouga / CSHL (1 allele)
Border Recovery
Myouga / JIC (1 allele)
Database Release December, 2010
Predicted Sequences
Gene:2153 nucleotides
mRNA: 1442 nucleotides
Protein:  346 amino acids
cDNA Status FLcDNA Available: AY053410
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Brassica napus (82%)
Model Genomes:  Synechocystis (60%)
Subcellular Localization TargetP Targeted to Chloroplasts
SUBA
mRNA Expression Data NASCArray Spot History for 251120_at
    
Mutant Information
Allele Symbol emb 3126-1emb 3126-2
Mutant Class Embryo DefectiveEmbryo Defective
Source of Mutant Myouga / RikenMyouga / CSHL
Mutant Line Number RATM53-3245-1CSHL_GT6376
Ecotype NossenLandsberg erecta
Genetic Background   
ABRC Stock   
Mutagen Treatment TransposonTransposon
Insertion Mutant Yes   DetailsYes   Details
Flanking Sequence   
Location of Mutation Intron 3Exon 2
Terminal Phenotype PreglobularPreglobular
Nomarski Phenotype Globular
Allelism Evidence Reference AlleleComplementation Test; Sequence Identity
Database Release December, 2010December, 2010
Seed Color   
Embryo Color   
Percent Mutant Seeds 26.1 %24.6 %
Chi - Square 0.6<0.1
Seeds Counted 881410
Percent Top Half   
Chi - Square   
Average Seed Length   
Average Embryo Length