OSU Syngenta vbi

SeedGenes Profile: EMB 3144

Gene Information
Gene Symbol EMB 3144
Chromosome Locus At5g64580   tair
Alleles in Database 3   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function Uncertain
Function Details AAA ATPase
Gene Evidence
Border Recovery
Myouga / Riken (1 allele)
Border Recovery
Meinke / SAIL (1 allele)
Border Recovery
Meinke / Salk (1 allele)
Database Release December, 2010
Predicted Sequences
Gene:4439 nucleotides
mRNA: 2823 nucleotides
Protein:  855 amino acids
cDNA Status EST Identified
Top BLAST Hits
Arabidopsis: AT1G50250.1 (39%)
Plant ESTs: Brassica napus (95%)
Model Genomes:  Synechocystis (39%)
Subcellular Localization TargetP Targeted to Chloroplasts
SUBA
mRNA Expression Data NASCArray Spot History for 247235_at
    
Mutant Information
Allele Symbol emb 3144-1emb 3144-2
Mutant Class Embryo DefectiveEmbryo Defective
Source of Mutant Myouga / RikenMeinke / SAIL
Mutant Line Number RATM52-0428-1SAIL_74_G12
Ecotype NossenColumbia
Genetic Background   
ABRC Stock   
Mutagen Treatment TransposonT-DNA
Insertion Mutant Yes   DetailsYes   Details
Flanking Sequence   
Location of Mutation  Exon 8
Terminal Phenotype GlobularTransition
Nomarski Phenotype
Allelism Evidence Reference AlleleComplementation Test; Sequence Identity
Database Release December, 2010December, 2010
Seed Color   
Embryo Color   
Percent Mutant Seeds 22.4 %24.6 %
Chi - Square 4.3<0.1
Seeds Counted 1257820
Percent Top Half   
Chi - Square   
Average Seed Length   
Average Embryo Length