SeedGenes Profile: EMB 3146

Gene Information Gene Symbol EMB 3146 Chromosome Locus At1g12410   Alleles in Database 3   See List OR Show All Identity Confidence Confirmed Alias Symbol CLPR 2 (K. van Wijk) Sequence Identity Gene Class Embryo Defective Predicted Function Chloroplast Clp Protease Proteolytic Subunit Function Details None Gene Evidence Border Recovery van Wijk / SAIL (1 allele) Border Recovery Myouga / Salk (2 alleles) Database Release December, 2010 Predicted Sequences Gene: 2095 nucleotides mRNA: 1079 nucleotides Protein:   279 amino acids cDNA Status FLcDNA Available: AY057617 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Brassica napus (94%) Model Genomes:   Synechocystis (47%) Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 259521_at

Mutant Information Allele Symbol clpr 2-3 Mutant Class Embryo Defective Source of Mutant van Wijk / SAIL Mutant Line Number SAIL_98_C01 Ecotype Columbia Genetic Background   ABRC Stock   Mutagen Treatment T-DNA Insertion Mutant Yes   Details Flanking Sequence   Location of Mutation Intron 6 Terminal Phenotype Cotyledon Nomarski Phenotype   Allelism Evidence Complementation Test; Sequence Identity Database Release December, 2010 Seed Color   Embryo Color   Percent Mutant Seeds   Chi - Square   Seeds Counted   Percent Top Half   Chi - Square   Average Seed Length   Average Embryo Length