OSU Syngenta vbi

SeedGenes Profile: HISN 6A

Gene Information
Gene Symbol HISN 6A
Chromosome Locus At5g10330   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol HPA 1 (X. Mo; P. Wu) Sequence Identity
EMB 2196 (D. Meinke) Alternate Name
Gene Class Embryo Defective
Predicted Function Histidinol Phosphate Aminotransferase
Function Details Histidine biosynthesis
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Border Recovery
Meinke / SAIL (1 allele)
Database Release March, 2003
Predicted Sequences
Gene:2276 nucleotides
mRNA: 1611 nucleotides
Protein:  417 amino acids
cDNA Status FLcDNA Available: AY050832
Top BLAST Hits
Arabidopsis: AT1G71920.1 (99%)
Plant ESTs: Brassica napus (88%)
Model Genomes:  Neurospora crassa (35%)
Subcellular Localization TargetP Targeted to Chloroplasts
mRNA Expression Data NASCArray Spot History for 260172_s_at
Mutant Information
Allele Symbol hisn 6a-2
Mutant Class Embryo Defective
Source of Mutant Meinke / SAIL
Mutant Line Number SAIL_750_F1
Ecotype Columbia
Genetic Background  
ABRC Stock  
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence  
Location of Mutation Exon 7
Terminal Phenotype Preglobular  Details
Nomarski Phenotype Preglobular
Allelism Evidence Complementation Test; Sequence Identity
Database Release October, 2007
Seed Color White
Embryo Color White
Percent Mutant Seeds 25.4 %
Chi - Square 0.1
Seeds Counted 1228
Percent Top Half 59.2 %
Chi - Square 10.8
Average Seed Length 370 ± 100 µm
Average Embryo Length 20 ± 20 µm