OSU Syngenta vbi

SeedGenes Profile: HISN 6A

Gene Information
Gene Symbol HISN 6A
Chromosome Locus At5g10330   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol HPA 1 (X. Mo; P. Wu) Sequence Identity
EMB 2196 (D. Meinke) Alternate Name
Gene Class Embryo Defective
Predicted Function Histidinol Phosphate Aminotransferase
Function Details Histidine biosynthesis
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Border Recovery
Meinke / SAIL (1 allele)
Database Release March, 2003
Predicted Sequences
Gene:2276 nucleotides
mRNA: 1611 nucleotides
Protein:  417 amino acids
cDNA Status FLcDNA Available: AY050832
Top BLAST Hits
Arabidopsis: AT1G71920.1 (99%)
Plant ESTs: Brassica napus (88%)
Model Genomes:  Neurospora crassa (35%)
Subcellular Localization TargetP Targeted to Chloroplasts
SUBA
mRNA Expression Data NASCArray Spot History for 260172_s_at
    
Mutant Information
Allele Symbol hisn 6a-1hisn 6a-2
Mutant Class Embryo DefectiveEmbryo Defective
Source of Mutant Meinke / SyngentaMeinke / SAIL
Mutant Line Number 69725SAIL_750_F1
Ecotype ColumbiaColumbia
Genetic Background qrt 
ABRC Stock CS16211 
Mutagen Treatment T-DNAT-DNA
Insertion Mutant Yes   DetailsYes   Details
Flanking Sequence Details  (Help) 
Location of Mutation Exon 2Exon 7
Terminal Phenotype Preglobular  DetailsPreglobular  Details
Nomarski Phenotype Preglobular  ImagesPreglobular
Allelism Evidence Reference AlleleComplementation Test; Sequence Identity
Database Release March, 2003October, 2007
Seed Color WhiteWhite
Embryo Color WhiteWhite
Percent Mutant Seeds 25.0 %25.4 %
Chi - Square <0.10.1
Seeds Counted 10531228
Percent Top Half 54.4 %59.2 %
Chi - Square 2.010.8
Average Seed Length 340 ± 50 µm370 ± 100 µm
Average Embryo Length 15 ± 0 µm20 ± 20 µm