Aug 17, 2018 4:33 PM
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Database Query
SeedGenes Profile: PAC
Gene Information
Gene Symbol
PAC
Chromosome Locus
At2g48120
Alleles in Database
2
See List
OR
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Identity Confidence
Confirmed
Alias Symbol
Gene Class
Seed Pigment
Predicted Function
Uncertain
Function Details
Postulated to function in chloroplast mRNA maturation
Gene Evidence
Molecular Complementation
P. Scolnik (1 allele)
Border Recovery
P. Scolnik (1 allele)
Single Border Recovery
Meinke / Syngenta (1 allele)
Database Release
March, 2002
Predicted Sequences
Gene:
1817 nucleotides
mRNA:
1277 nucleotides
Protein:
313 amino acids
cDNA Status
FLcDNA Available:
L35241
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Brassica napus (88%)
Model Genomes:
None
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
262316_at
Mutant Information
Allele Symbol
pac-1S
Mutant Class
Seed Pigment
Source of Mutant
Meinke / Syngenta
Mutant Line Number
54333
Ecotype
Columbia
Genetic Background
ABRC Stock
CS16058
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Details
(Help)
Location of Mutation
Exon 2
Terminal Phenotype
Pigment Defective
Nomarski Phenotype
Allelism Evidence
Reference Allele
Database Release
March, 2002
Seed Color
Pale Yellow
Embryo Color
Pale Yellow
Percent Mutant Seeds
24.2 %
Chi - Square
0.4
Seeds Counted
1030
Percent Top Half
52.2 %
Chi - Square
0.5
Average Seed Length
Average Embryo Length