Aug 17, 2018 4:33 PM
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Database Query
SeedGenes Profile: PDE 135
Gene Information
Gene Symbol
PDE 135
Chromosome Locus
At2g26510
Alleles in Database
1
Identity Confidence
Not Confirmed
Alias Symbol
Gene Class
Seed Pigment
Predicted Function
Permease
Function Details
Membrane transport
Gene Evidence
Single Border Recovery
Meinke / Syngenta (1 allele)
Database Release
March, 2002
Predicted Sequences
Gene:
3686 nucleotides
mRNA:
1995 nucleotides
Protein:
551 amino acids
cDNA Status
FLcDNA Available:
AF370518
Top BLAST Hits
Arabidopsis
:
AT2G34190.1 (55%)
Plant ESTs:
Brassica napus (89%)
Model Genomes:
Homo sapiens (33%)
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
245046_at
Mutant Information
Allele Symbol
pde 135
Mutant Class
Seed Pigment
Source of Mutant
Meinke / Syngenta
Mutant Line Number
4788
Ecotype
Columbia
Genetic Background
ABRC Stock
CS16061
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Details
(Help)
Location of Mutation
Exon 1
Terminal Phenotype
Pigment Defective
Nomarski Phenotype
Allelism Evidence
Reference Allele
Database Release
March, 2002
Seed Color
Pale Yellow
Embryo Color
Pale Yellow
Percent Mutant Seeds
22.0 %
Chi - Square
2.4
Seeds Counted
576
Percent Top Half
45.3 %
Chi - Square
1.1
Average Seed Length
Average Embryo Length