SeedGenes Profile: PDE 225

Gene Information Gene Symbol PDE 225 Chromosome Locus At5g24314   Alleles in Database 1 Identity Confidence Not Confirmed Alias Symbol   Gene Class Seed Pigment Predicted Function Unknown Function Details None Gene Evidence Double Border Recovery Meinke / Syngenta (1 allele) Database Release March, 2002 Predicted Sequences Gene: 1500 nucleotides mRNA: 636 nucleotides Protein:   161 amino acids cDNA Status FLcDNA Available: AK220647 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Brassica napus (87%) Model Genomes:   None Subcellular Localization TargetP Targeted to Chloroplasts SUBA

Mutant Information Allele Symbol pde 225 Mutant Class Seed Pigment Source of Mutant Meinke / Syngenta Mutant Line Number 19390 Ecotype Uncertain Genetic Background   ABRC Stock CS16063 Mutagen Treatment T-DNA Insertion Mutant Yes   Details Flanking Sequence Details  (Help) Location of Mutation Exon 1 Terminal Phenotype Pigment Defective Nomarski Phenotype   Allelism Evidence Reference Allele Database Release March, 2002 Seed Color Pale Yellow Embryo Color Pale Yellow Percent Mutant Seeds 30.7 % Chi - Square 19.7 Seeds Counted 1158 Percent Top Half 52.1 % Chi - Square 0.6 Average Seed Length   Average Embryo Length